Here is a drawing of our microwave spectrometer:



The microwaves are injected into the cavity at the (left) mirror,
the pulse of radiation builds up a brief standing wave in the cavity provided the second mirror is n/2 wavelengths distance form the first mirror.  Molecules of interest are injected into the cavity from above, and absorb part of the standing wave, a consequent emission signal is then recorded after 'listening' at the same antenna where the signal was sent in.